Assembled contigs

Basic Metadata

DOI Maintainer:
Charlie Gough

Creator:
Vengamanaidu Modepalli (Marine Biological Association)

Publisher:
Marine Biological Association

Year of Publication:
2020

Resource Type:
Dataset

Abstract:
-

Description:
Processed reads from each sample were mapped to the S. ciliatum genome by using HISAT2. Next, the mapped reads were passed to StringTie for transcript assembly. After initial assembly, all assembled transcripts from regeneration and development were merged by using StringTie's merge module, which merges all the gene structures found in any of the samples.

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DOI and references

DOI:
10.17031/1669

Preferred Citation:
Vengamanaidu Modepalli (Marine Biological Association) (2020): Assembled contigs. Marine Biological Association. (Dataset). https://doi.org/10.17031/1669

Resource summary

Language:
English

Resource Type:
Dataset

Versions of Resource

Original